Protein Sequence of the antigen tr|Q89218|Q89218_VARV RNA polymerase-associated transcription-specificity factor RAP94 OS=Variola virus OX=10255 GN=J4L PE=3 SV=1

MDSKETILIEIIPKIKAYLLDANISPKSYDDFISRNKNIFVINLYNVSAITEEDIRLLYTTIEQNIDANDQTLVAIFSYIGYKFEQTVKEEISTSLSLNDKNTTDEMTYNLYDLFFNTLDMYLRQKKISILVNDDVRGDVIVSYKNSDLVSSFNAELEPEIKKIPFNMKNLLPYLEKNLDQLRFSKKYLDFAYLCRHIGIPISKKKYNVRYVFLYKIDGLSIPIIIKDFLDVKYVYLENTGKIYKNSFSEDHNNSLSDWGKVIIPLLKDRHLYSYIFLSSYHLHSYYTDLIAKDEPVFIKRKKLDIIEIDEPEAWKRDVKVEFAPCEHQIRLKEAMKVDANYFTKINNFANEFIYYEDGVAYCRVCGINIPIFNLDAADVIKNTVIVSTFNKTIFLSEPYSYFVHSQRFIFNIIMSFDNIMKSQTWVMKYNINRLILNFFIDINSRRQEYEKKFSSEIKRGLFFLRLSANLFESQVSSTELFYVSKMLNLNYIVALVIILNSSADFIVSYMKSKNKTVEESTLKYAISVVIYDFLVKTRICEKGSLDTIVLFTDVYTSIMPEELDLHFQRITLELRKLVSIQRSALEPNYDVESRGEELPLSTLKFFDTSTIIVKTMAPVHTCVEQKIVAPTPSVEPTDASLKQFKELTCDEDIKILIRVHDTNATKLVIFPSHLKIEIERKKLIIPLKSLYITNTLKYYYSNSYLYIFRFGDPMPFEEELIDHEHAQYKINCYNILRYHLLPDSDVFVYFSNSLNREALEYAFYIFLSKYVNVKQWIDENITRIRELYMINFNN

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Epitope Number Epitope Epitope Prediction Score Epitope Start Epitope End
1 MDSKETILIEI 1.0 1 11
2 SPKSYDDFISRNK 1.0 25 37
3 NIFVINLYNVSAIT 0.9577177 38 51
4 EEDIRLLYTTIEQ 1.0 52 64
5 KEEISTSLSL 1.0 89 98
6 RQKKISILVND 0.5174501 124 134
7 LVSSFNAELEP 1.0 149 159
8 YLEKNLDQLRFS 1.0 174 185
9 VRYVFLYKID 1.0 209 218
10 DFLDVKYVYLENT 1.0 228 240
11 SYIFLSSYHLHSYY 0.9999973 274 287
12 TDLIAKDEP 1.0 288 296
13 VFIKRKKLDI 1.0 297 306
14 HQIRLKEAMKVDA 1.0 328 340
15 NEFIYYEDGVA 1.0 351 361
16 FNKTIFLSEPYS 0.9999999 390 401
17 IKRGLFFLRL 0.9999998 458 467
18 LNYIVALVIILN 1.0 490 501
19 SSADFIVSYMKSK 0.99999976 502 514
20 YAISVVIYDF 1.0 525 534
21 TIVLFTDVY 1.0 548 556
22 TSIMPEELDL 1.0 557 566
23 HFQRITLELRKLV 0.9999998 567 579
24 SIQRSALEPN 0.99999845 580 589
25 YDVESRGEELPLST 0.9983519 590 603
26 TMAPVHTCVE 1.0 616 625
27 QKIVAPTPSV 0.99999917 626 635
28 VHDTNATKLVIFP 1.0 660 672
29 SHLKIEIERKKLII 1.0 673 686
30 MPFEEELIDH 0.9898594 715 724
31 EHAQYKINCYN 0.99910116 725 735